DeepPrime

Deep learning-based model that can predict the prime editing efficiency for all possible pegRNAs for a given target sequence

Published Paper Publication

PE system: Choose model conditions closest to experimental parameters

Edit type

Edit length

Maximum Reverse Transcription Template (RTT) length in nucleotides (nt). Maximum= 40nt

Select Primer Binding Site (PBS) Range

MinPBS Length

MaxPBS Length

Input Examples:
Substitution Insertion Deletion

Input Unedited Sequence(s) (121bp), comma-separated

Input Edited Sequence(s) (121bp), comma-separated

Analysis Mode:
Model: Installation of ClinVar variant at target site
Therapy: Correction of ClinVar variant at target site

Enter VCV ID or Variant ID: ex) VCV000009325.76 -or- 9325